GWAS-related eQTLs across different cancer types
We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).
|
Cancer type
|
eQTL type
|
tagSNP
|
Gene position (hg19)
|
p-value
|
|||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| THYM | cis | rs9815354 | 1 | rs1716984 | chr3:41965532 | ULK4 | chr3:41288091-42003660:- | -1.02 | -11.59 | 6.88E-20 | Diastolic blood pressure |
| THYM | cis | rs9815354 | 1 | rs1716987 | chr3:41970516 | ULK4 | chr3:41288091-42003660:- | -0.99 | -10.55 | 1.1E-17 | Diastolic blood pressure |
| THYM | cis | rs9815354 | 1 | rs1716993 | chr3:41974556 | ULK4 | chr3:41288091-42003660:- | -0.96 | -10.38 | 2.59E-17 | Diastolic blood pressure |
| THYM | cis | rs9815354 | 1 | rs1716997 | chr3:41924333 | ULK4 | chr3:41288091-42003660:- | -1 | -11.02 | 1.12E-18 | Diastolic blood pressure |
| THYM | cis | rs9815354 | 1 | rs1716999 | chr3:41930041 | ULK4 | chr3:41288091-42003660:- | -1.02 | -11.47 | 1.22E-19 | Diastolic blood pressure |
| THYM | cis | rs9815354 | 1 | rs1717000 | chr3:41930219 | ULK4 | chr3:41288091-42003660:- | -1.02 | -11.47 | 1.22E-19 | Diastolic blood pressure |
| THYM | cis | rs9815354 | 1 | rs1717001 | chr3:41934949 | ULK4 | chr3:41288091-42003660:- | -1 | -11.02 | 1.12E-18 | Diastolic blood pressure |
| THYM | cis | rs9815354 | 1 | rs1717006 | chr3:41940448 | ULK4 | chr3:41288091-42003660:- | 1 | 11.13 | 6.37E-19 | Diastolic blood pressure |
| THYM | cis | rs9815354 | 1 | rs1717009 | chr3:41946308 | ULK4 | chr3:41288091-42003660:- | -1.02 | -11.47 | 1.22E-19 | Diastolic blood pressure |
| THYM | cis | rs9815354 | 1 | rs1717011 | chr3:41980199 | ULK4 | chr3:41288091-42003660:- | -1.02 | -11.59 | 6.88E-20 | Diastolic blood pressure |
| THYM | cis | rs9815354 | 1 | rs1717014 | chr3:41917395 | ULK4 | chr3:41288091-42003660:- | 1 | 11.02 | 1.12E-18 | Diastolic blood pressure |
| THYM | cis | rs9815354 | 1 | rs1717017 | chr3:41915616 | ULK4 | chr3:41288091-42003660:- | 1 | 11.02 | 1.12E-18 | Diastolic blood pressure |
| THYM | cis | rs9815354 | 1 | rs1717020 | chr3:41981490 | ULK4 | chr3:41288091-42003660:- | 1.02 | 11.47 | 1.26E-19 | Diastolic blood pressure |
| THYM | cis | rs9815354 | 1 | rs1717021 | chr3:41983860 | ULK4 | chr3:41288091-42003660:- | -1.02 | -11.59 | 6.88E-20 | Diastolic blood pressure |
| THYM | cis | rs9815354 | 1 | rs1717024 | chr3:41984888 | ULK4 | chr3:41288091-42003660:- | -1.01 | -11.41 | 1.64E-19 | Diastolic blood pressure |